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Growing microgreens in a greenhouse

The short answer

Microgreens are harvested at the first true leaf, 7 to 21 days from sowing, at seeding densities far higher than any other crop. They need a daily light integral of only 6 to 12 mol/m2/day, bottom watering rather than overhead, and strong airflow, because the dense stand and constant moisture that make them fast are exactly the conditions damping off requires.

Days to harvest
7 to 21
Target DLI
6 to 12
Blackout period
2 to 4 days
Watering
From below, always

Researched from published specifications and verified owner reviews · Updated 2026-08-16

Microgreens are the fastest return a greenhouse produces. A tray sown today is harvested inside a fortnight, sometimes inside a week, and it occupies a bench rather than a bed. That makes them the ideal crop for the gaps between transplant runs, and the ideal thing to grow in the weeks when nothing else in a greenhouse is doing much.

They are also the crop most likely to fail in an unfamiliar way. Everything that makes them fast, dense sowing, constant surface moisture and warmth, is precisely what damping off needs. Growing microgreens well is largely about managing that one risk.

Figure 1. Microgreens under cover, at a glance · 14 rows
Figure 1. Microgreens under cover, at a glance
MeasureFigureWhy it matters
Germination soil temperature 65 to 75 degF Most microgreen species germinate fast and evenly in this band, and higher temperatures increase damping off risk sharply.
Days to emergence 2 to 4 days At the optimum soil temperature, in a moist starting medium.
Optimum day temperature 65 to 75 degF Where growth is fastest. Above the range, specific processes start failing.
Optimum night temperature 60 to 65 degF The day to night difference controls stem elongation and plant habit.
Survives down to 40 degF Brief exposure on an acclimated plant, not a sustained figure.
Trouble above 80 degF Above this, growth becomes leggy and damping off risk in a dense wet stand rises quickly.
Target daily light integral 6 to 12 mol/m2/day Moles per square meter per day. Below this the crop holds rather than grows.
PPFD needed at 16 hours 104 to 208 umol/m2/s What a fixture must deliver at the canopy to reach that daily total.
Spacing under cover Broadcast dense, roughly 10 to 30 g of seed per standard 1020 tray by species Wider than outdoor spacing, because still air makes disease the limit.
Floor area per plant A full 1020 tray is about 1.6 sq ft Includes each plant share of shoulder and path space.
Sowing depth Surface sown, pressed in, not buried The crop is harvested above the medium, so seed sits on the surface under a weighted blackout cover instead.
Soil pH 5.5 to 6.5 Outside this band, nutrient availability rather than nutrient supply becomes the limit.
Days to first harvest 7 to 21 days depending on species From sowing, under cover, at good light. Winter timings run considerably longer.
Humidity preference 0.4 to 0.8 kPa VPD during germination, higher after Expressed as vapor pressure deficit, which accounts for temperature as relative humidity does not.
Figures are researched from published horticultural references and manufacturer growing guides, and are a starting point to check against your own conditions rather than a specification. Seeding rates vary enormously by species and seed size. Large seeds such as pea and sunflower are sown at several times the weight of small seeds such as broccoli or amaranth for the same tray coverage, so buy seed by weight and expect to calibrate over two or three sowings.

How do you start microgreens under cover?

Fill a standard 1020 tray with an inch to an inch and a half of fine sterile medium, level it and firm it lightly. Depth matters less than levelness: an uneven surface produces an uneven stand, and in a crop harvested with a single cut that shows immediately.

Use a fresh sterile medium every time. A fine coir seed starting mix is ideal, and reused medium is the single most common cause of a tray collapsing. This is one crop where reusing medium is never worth the saving.

Broadcast seed densely and evenly across the surface, then press it into contact rather than covering it. Density is far higher than any other crop, and it varies by seed size: a tray of sunflower takes several times the weight of a tray of broccoli. Weigh rather than eyeballing, and record what worked.

Cover for a blackout period of two to four days, with a solid cover and often a light weight on top. The darkness and the pressure together produce even germination and stems that push up uniformly rather than at different rates. Then uncover into full light.

Uncover on time, not late

The blackout period is measured in days, and leaving it a day too long produces pale stretched stems that fall over the moment they see light. Check under the cover daily from day two. Once most seed has germinated and the stems are lifting the cover slightly, the blackout is finished.

What temperature does microgreens need in a greenhouse?

The working range is 65 to 75 degrees Fahrenheit by day and 60 to 65 at night, which is a comfortable greenhouse in the shoulder seasons and needs shading in summer.

Warmth speeds germination and increases damping off risk in the same motion, so this is not a crop where more heat is better. Above about 80 degrees a dense wet tray becomes a poor bet, and in high summer microgreens are often better grown on a shaded bench or indoors than in the body of a greenhouse.

At the cold end they simply slow down. Below about 55 degrees growth stretches out considerably, which is not harmful but removes the main advantage of the crop, which is speed. A propagation bench held at a steady temperature is the ideal environment.

Air movement is the most important environmental control. A dense stand of seedlings in still air holds a saturated layer at the medium surface, and that is where damping off begins. A small fan blowing gently across the trays, running continuously, changes the failure rate dramatically.

How much light does microgreens need?

Microgreens need very little light: 6 to 12 moles per square meter per day, which over a 16 hour photoperiod is roughly 104 to 208 micromoles per square meter per second at the canopy. That is around half what vegetable seedlings want and a fraction of what a fruiting crop needs.

That low requirement makes them the most practical crop to grow under supplemental lighting through winter, when a greenhouse is otherwise short of light for almost everything. A single fixture such as linked LED strips over a bench comfortably supports a rolling microgreen succession year round.

Light quality matters less than duration and consistency here, because the crop is harvested before it does much photosynthesis. What matters is enough light immediately after the blackout period to stop the stems stretching further, so uncover into good light rather than into a dim corner.

Spacing, support and training

There is no spacing in the conventional sense. Microgreens are broadcast at densities that would be absurd for any other crop, and the plants support each other as they grow, which is part of why the stand stays upright.

Density is the variable to calibrate. Too thin and the yield per tray is poor and the stems flop. Too thick and airflow at the medium surface disappears, which is the damping off condition again. Two or three sowings of a species is usually enough to find the right weight.

Species can be mixed in one tray only if they germinate and mature at similar rates. Mixing a three-day germinator with a seven-day one produces a tray that is half overgrown and half emerging on harvest day. Grow mixes as separate trays and combine after cutting.

Trays should be raised on a bench rather than sitting on the floor, both for airflow underneath and because a floor-level tray is the first thing slugs find in a greenhouse.

Watering and feeding

Water from below, always, once the seed has germinated. Overhead watering on a dense stand knocks seedlings flat, keeps the leaf surfaces wet, and drives damping off harder than any other single practice.

The standard method is a solid tray beneath the growing tray, filled with a shallow depth of water and allowed to be taken up by capillary action. A no-hole tray underneath a mesh tray is the classic arrangement, and capillary matting achieves the same on a bench holding several trays.

Before germination, a fine mist on the surface is appropriate and often necessary to keep the seed in contact with moisture. A hand mister is enough at this scale, and the misting stops the moment the seed has germinated.

Do not let the bottom tray sit full continuously. Fill it, let the medium take up what it needs over an hour or two, and tip out the remainder. A tray standing permanently in water is anaerobic at the base and will rot.

No feeding is needed. The crop is harvested before it exhausts the seed reserves, and adding nutrient to a dense wet tray increases microbial growth without increasing yield.

What goes wrong with greenhouse microgreens?

Figure 2. Microgreens problems under cover, and what actually causes them · 8 rows
Figure 2. Microgreens problems under cover, and what actually causes them
What you seeUsual causeWhat to do
Seedlings collapse at the medium surface and the stand goes down in patches Damping off, from dense sowing, constant surface moisture, warmth and still air Fresh sterile medium every time, water from below, run a fan continuously, and reduce sowing density.
White fuzzy growth on the medium surface Usually harmless saprophytic mould, but sometimes early damping off Increase airflow immediately and reduce surface moisture. If seedlings start collapsing, discard the tray.
Fine white fuzz on the seedling roots themselves Root hairs, which are normal and constantly mistaken for mould Nothing. Root hairs are evenly distributed along the root and do not spread across the medium surface.
Tall pale stems that fall over when uncovered Blackout period left too long, or insufficient light immediately after uncovering Check under the cover daily from day two, and uncover into good light rather than a dim corner.
Uneven germination across the tray Uneven medium surface, uneven seed distribution, or uneven moisture Level and firm the medium properly, broadcast more carefully, and weight the blackout cover evenly.
Seed hulls stuck on the leaves at harvest Common in sunflower and beet, and usually a moisture or weighting issue during germination Weight the blackout cover more heavily, which encourages the seedling to push the hull off as it lifts.
Small dark flies over the medium surface Fungus gnats, whose larvae need constantly wet medium Water from below only, let the surface dry between waterings, and use sticky traps laid flat on the medium.
Sour smell from the tray Anaerobic conditions at the base, from a tray standing permanently in water Fill the bottom tray, let it take up what it needs, then tip out the remainder rather than leaving it standing.
Greenhouse growing concentrates a small number of failure modes rather than producing new ones. Nearly everything in this table traces back to temperature, water consistency, humidity or light.

Which types work best under cover?

Figure 3. Microgreens types suited to growing under cover · 6 rows
Figure 3. Microgreens types suited to growing under cover
TypeSuitsNote
Brassicas: broccoli, radish, mustard, kale Beginners and fast turnover Fast, reliable, small seeded and ready in 7 to 12 days. The easiest place to start.
Pea shoots Yield per tray Large seed, high yield and a substantial texture. Soak the seed before sowing and expect a heavier tray.
Sunflower Flavour and substance Excellent eating, and the most prone to hull retention, so weight the blackout cover well.
Beet and chard Colour Slower at 14 to 21 days, and each seed is a cluster producing several seedlings, so sow thinner than instinct.
Amaranth Colour on a plate Very small seed and slow, but the colour is unmatched and a little goes a long way.
Basil and coriander Flavour rather than volume Slow at 14 to 21 days and lower yielding, but far stronger in flavour than the same herbs at full size.
Variety names change between seed suppliers and between regions. Choose on the described characteristic rather than on the name, and prefer anything a supplier explicitly describes as suited to protected or greenhouse growing.

Start with brassicas. Broccoli, radish and mustard germinate in two days, are ready in a week to ten days, tolerate a wide range of conditions, and are cheap enough that a failed tray costs almost nothing while you calibrate density and watering.

Buy seed intended for sprouting or microgreens where possible. It is sold untreated and by weight, which is what this crop needs, whereas garden seed is sold by count in small packets and is sometimes treated in ways unsuitable for a crop eaten whole at seedling stage.

Harvesting and what comes next

Harvest at the first true leaf, when the seed leaves are fully expanded and the first true leaf is just appearing. Earlier is acceptable and gives a smaller yield; much later and the stems toughen and the flavour becomes harsh.

Cut with a sharp blade just above the medium surface, in one sweeping motion across the tray. Sharp shears work for small quantities and a long sharp knife is faster across a full tray. A clean cut keeps far better than a torn one.

Harvest dry rather than wet. Cutting a wet stand produces greens that deteriorate within a day. Stop bottom watering the day before, let the foliage dry, and cut in the morning.

Do not expect a second cut from most species. Microgreens are a single-harvest crop, and the stubble left after cutting rots rather than regrowing. Pea shoots are the main exception and will give a smaller second cut.

Compost the spent medium and root mat, and start the next tray with fresh medium. The root mat is the most likely place for a pathogen to persist into the next sowing.

Equipment for growing microgreens under cover

Microgreens need very little equipment and are extremely unforgiving about two things: sterile medium and water delivered from below.

Microgreens turn a greenhouse bench into a weekly harvest with almost no infrastructure. Sow into fresh sterile medium, water from below, keep air moving, and cut at the first true leaf. They are also the best way to keep a propagation bench earning its space in the weeks between transplant runs.

Related on this site

Common questions

5 answers

+ How long do microgreens take to grow?

Seven to twenty-one days depending on species. Brassicas such as broccoli, radish and mustard are the fastest at 7 to 12 days, pea shoots and sunflower run 10 to 14, and beet, chard, amaranth, basil and coriander take 14 to 21. All of them include a blackout period of two to four days at the start, during which the tray is covered and often weighted.

+ Why do my microgreens keep collapsing?

Damping off, which is a fungal collapse at the medium surface driven by dense sowing, constant surface moisture, warmth and still air. All four are inherent to the crop, which is why prevention is the whole strategy. Use fresh sterile medium every single time, water from below rather than overhead, run a small fan continuously across the trays, and reduce sowing density if the stand looks solid.

+ Should you water microgreens from the top or the bottom?

From below, once the seed has germinated. Overhead watering knocks a dense stand flat and keeps leaf surfaces wet, which drives damping off harder than anything else. Fill a solid tray beneath the growing tray, let capillary action take up what the medium needs over an hour or two, then tip out the remainder rather than leaving the tray standing in water.

+ Do microgreens need grow lights?

Only in low light conditions, and even then modestly. They want a daily light integral of just 6 to 12 mol/m2/day, roughly half what vegetable seedlings need, so a greenhouse supplies plenty for most of the year. In winter a single strip fixture over a bench comfortably supports a rolling succession, which makes them the most practical crop to grow under lights when everything else is short of light.

+ Can you harvest microgreens twice?

Generally no. Most species are cut just above the medium surface and the remaining stubble rots rather than regrowing, because the growing point was taken with the harvest. Pea shoots are the main exception and will give a smaller second cut. For everything else, compost the medium and the root mat and start a fresh tray, since the root mat is where a pathogen would persist.

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